Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000027890
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Position
Contig125:351769-357041 (+)
5272bp
Gene Type
gene
Gene Description (Protein Product)
MADS-box protein
Organism
Fraxinus excelsior
Also AS AT3G02310

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000232980 transcription factor
FRAEX38873_v2_000199610 MADS-box protein SOC1-like
FRAEX38873_v2_000366280 transcription regulatory region sequence-specific DNA binding
Regulatory gene
FRAEX38873_v2_000001960 GRAS domain family
FRAEX38873_v2_000003780 Belongs to the GRAS family
FRAEX38873_v2_000004990 Mini zinc finger protein
Target gene
FRAEX38873_v2_000000020 GDP-fucose protein O-fucosyltransferase
FRAEX38873_v2_000000060 CDK-activating kinase assembly factor MAT1
FRAEX38873_v2_000000080 Belongs to the adenylate kinase family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003002 regionalization BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008134 transcription factor binding MF
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009791 post-embryonic development BP
GO:0009888 tissue development BP
GO:0009908 flower development BP
GO:0010022 meristem determinacy BP
GO:0010073 meristem maintenance BP
GO:0010093 specification of floral organ identity BP
GO:0010582 floral meristem determinacy BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0046983 protein dimerization activity MF
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048444 floral organ morphogenesis BP
GO:0048449 floral organ formation BP
GO:0048507 meristem development BP
GO:0048509 regulation of meristem development BP
GO:0048608 reproductive structure development BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0090567 reproductive shoot system development BP
GO:0090696 post-embryonic plant organ development BP
GO:0090697 post-embryonic plant organ morphogenesis BP
GO:0090698 post-embryonic plant morphogenesis BP
GO:0090701 specification of plant organ identity BP
GO:0097159 organic cyclic compound binding MF
GO:0099402 plant organ development BP
GO:1901363 heterocyclic compound binding MF
GO:1905392 plant organ morphogenesis BP
GO:1905393 plant organ formation BP