Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
FRAEX38873_v2_000058300
View in Genome Browser
Position
Contig1599:29877-34640 (+)
4763bp
Gene Type
gene
Gene Description (Protein Product)
Vacuolar import and degradation protein
Organism
Fraxinus excelsior
Also AS AT2G37680

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000117990 Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
FRAEX38873_v2_000140050 Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
FRAEX38873_v2_000285130 Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
Regulatory gene
FRAEX38873_v2_000004990 Mini zinc finger protein
FRAEX38873_v2_000008150 Dof zinc finger protein
FRAEX38873_v2_000013920 Zinc-finger homeodomain protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)