Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000077980
View in Genome Browser
Position
Contig1838:36332-38498 (+)
2166bp
Gene Type
gene
Gene Description (Protein Product)
Nucleoredoxin
Organism
Fraxinus excelsior
Also AS AT1G60420

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000217160 protein FAR1-RELATED SEQUENCE
FRAEX38873_v2_000210970 Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins
FRAEX38873_v2_000162170 Belongs to the 14-3-3 family
Regulatory gene
FRAEX38873_v2_000004990 Mini zinc finger protein
FRAEX38873_v2_000006340 Transcription factor
FRAEX38873_v2_000007570 AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000902 cell morphogenesis BP
GO:0000904 cell morphogenesis involved in differentiation BP
GO:0001558 regulation of cell growth BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004791 thioredoxin-disulfide reductase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006935 chemotaxis BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009605 response to external stimulus BP
GO:0009636 response to toxic substance BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009826 unidimensional cell growth BP
GO:0009856 pollination BP
GO:0009860 pollen tube growth BP
GO:0009932 cell tip growth BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010183 pollen tube guidance BP
GO:0010769 regulation of cell morphogenesis involved in differentiation BP
GO:0015036 disulfide oxidoreductase activity MF
GO:0016043 cellular component organization BP
GO:0016049 cell growth BP
GO:0016209 antioxidant activity MF
GO:0016491 oxidoreductase activity MF
GO:0016651 oxidoreductase activity, acting on NAD(P)H MF
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors MF
GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor MF
GO:0022414 reproductive process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0022604 regulation of cell morphogenesis BP
GO:0030154 cell differentiation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0040007 growth BP
GO:0040008 regulation of growth BP
GO:0040011 locomotion BP
GO:0042221 response to chemical BP
GO:0042330 taxis BP
GO:0043900 obsolete regulation of multi-organism process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0044706 multi-multicellular organism process BP
GO:0045595 regulation of cell differentiation BP
GO:0046686 response to cadmium ion BP
GO:0048468 cell development BP
GO:0048588 developmental cell growth BP
GO:0048589 developmental growth BP
GO:0048638 regulation of developmental growth BP
GO:0048856 anatomical structure development BP
GO:0048868 pollen tube development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0050918 positive chemotaxis BP
GO:0051128 regulation of cellular component organization BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051510 regulation of unidimensional cell growth BP
GO:0051704 obsolete multi-organism process BP
GO:0051716 cellular response to stimulus BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0060284 regulation of cell development BP
GO:0060560 developmental growth involved in morphogenesis BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080092 regulation of pollen tube growth BP
GO:0097237 cellular response to toxic substance BP
GO:0098754 detoxification BP
GO:0098869 cellular oxidant detoxification BP
GO:1990748 cellular detoxification BP
GO:2000241 regulation of reproductive process BP