Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000109090
View in Genome Browser
Position
Contig223:112506-135846 (+)
23340bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the STXBP unc-18 SEC1 family
Organism
Fraxinus excelsior
Also AS AT1G12360

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000349210 exocyst complex component
FRAEX38873_v2_000319090 Belongs to the synaptobrevin family
FRAEX38873_v2_000243850 Belongs to the synaptobrevin family
Regulatory gene
FRAEX38873_v2_000008150 Dof zinc finger protein
FRAEX38873_v2_000026520 dof zinc finger protein
FRAEX38873_v2_000035490 -

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0016020 membrane CC
GO:0019898 extrinsic component of membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0071944 cell periphery CC