Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000111670
View in Genome Browser
Position
Contig2269:114542-118311 (-)
3769bp
Gene Type
gene
Gene Description (Protein Product)
Microtubule-associated protein RP EB family member
Organism
Fraxinus excelsior
Also AS AT5G62500

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000133760 Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain
FRAEX38873_v2_000220090 Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain
FRAEX38873_v2_000286240 Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain
Regulatory gene
FRAEX38873_v2_000000110 GAGA binding protein-like family
FRAEX38873_v2_000008150 Dof zinc finger protein
FRAEX38873_v2_000013020 MADS-box transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity BP
GO:0000922 spindle pole CC
GO:0001932 regulation of protein phosphorylation BP
GO:0001934 positive regulation of protein phosphorylation BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005815 microtubule organizing center CC
GO:0005819 spindle CC
GO:0005856 cytoskeleton CC
GO:0005874 microtubule CC
GO:0005876 spindle microtubule CC
GO:0005881 cytoplasmic microtubule CC
GO:0005938 cell cortex CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0008017 microtubule binding MF
GO:0008022 obsolete protein C-terminus binding MF
GO:0008092 cytoskeletal protein binding MF
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009524 phragmoplast CC
GO:0009574 preprophase band CC
GO:0009605 response to external stimulus BP
GO:0009606 tropism BP
GO:0009612 response to mechanical stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009629 response to gravity BP
GO:0009630 gravitropism BP
GO:0009652 thigmotropism BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009958 positive gravitropism BP
GO:0010005 cortical microtubule, transverse to long axis CC
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010557 positive regulation of macromolecule biosynthetic process BP
GO:0010562 positive regulation of phosphorus metabolic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010628 positive regulation of gene expression BP
GO:0015630 microtubule cytoskeleton CC
GO:0015631 tubulin binding MF
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019899 enzyme binding MF
GO:0019900 kinase binding MF
GO:0019901 protein kinase binding MF
GO:0030496 midbody CC
GO:0030863 cortical cytoskeleton CC
GO:0030981 cortical microtubule cytoskeleton CC
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0031399 regulation of protein modification process BP
GO:0031401 positive regulation of protein modification process BP
GO:0032268 regulation of protein metabolic process BP
GO:0032270 positive regulation of protein metabolic process BP
GO:0033036 macromolecule localization BP
GO:0033674 positive regulation of kinase activity BP
GO:0042325 regulation of phosphorylation BP
GO:0042327 positive regulation of phosphorylation BP
GO:0042802 identical protein binding MF
GO:0043085 positive regulation of catalytic activity BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043549 regulation of kinase activity BP
GO:0044093 positive regulation of molecular function BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044448 obsolete cell cortex part CC
GO:0044464 obsolete cell part CC
GO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity BP
GO:0045787 positive regulation of cell cycle BP
GO:0045859 regulation of protein kinase activity BP
GO:0045860 positive regulation of protein kinase activity BP
GO:0045893 positive regulation of DNA-templated transcription BP
GO:0045935 positive regulation of nucleobase-containing compound metabolic process BP
GO:0045937 positive regulation of phosphate metabolic process BP
GO:0048471 perinuclear region of cytoplasm CC
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051179 localization BP
GO:0051246 regulation of protein metabolic process BP
GO:0051247 positive regulation of protein metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051254 positive regulation of RNA metabolic process BP
GO:0051338 regulation of transferase activity BP
GO:0051347 positive regulation of transferase activity BP
GO:0051726 regulation of cell cycle BP
GO:0055028 cortical microtubule CC
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0071900 regulation of protein serine/threonine kinase activity BP
GO:0071902 positive regulation of protein serine/threonine kinase activity BP
GO:0071944 cell periphery CC
GO:0080090 regulation of primary metabolic process BP
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0099568 cytoplasmic region CC
GO:1902680 positive regulation of RNA biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903508 positive regulation of nucleic acid-templated transcription BP
GO:1904029 regulation of cyclin-dependent protein kinase activity BP
GO:1904031 positive regulation of cyclin-dependent protein kinase activity BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP