Basic Information
Gene ID
FRAEX38873_v2_000119440
Position
Contig237:195626-198658 (+)
3032bp
Gene Type
gene
Gene Description (Protein Product)
Protein EARLY FLOWERING
Organism
Also AS AT2G25930

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000335890 E3 ubiquitin-protein ligase COP1-like
FRAEX38873_v2_000222790 Protein EARLY FLOWERING
FRAEX38873_v2_000222790 Protein EARLY FLOWERING 3-like
Regulatory gene
FRAEX38873_v2_000013020 MADS-box transcription factor
FRAEX38873_v2_000018390 Protein tesmin TSO1-like CXC 5
FRAEX38873_v2_000023980 MADS-box protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000902 cell morphogenesis BP
GO:0001101 response to acid chemical BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006950 response to stress BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007275 multicellular organism development BP
GO:0007602 phototransduction BP
GO:0007623 circadian rhythm BP
GO:0008150 biological_process BP
GO:0009266 response to temperature stimulus BP
GO:0009314 response to radiation BP
GO:0009409 response to cold BP
GO:0009416 response to light stimulus BP
GO:0009581 detection of external stimulus BP
GO:0009582 detection of abiotic stimulus BP
GO:0009583 detection of light stimulus BP
GO:0009585 red, far-red light phototransduction BP
GO:0009605 response to external stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009639 response to red or far red light BP
GO:0009648 photoperiodism BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009737 response to abscisic acid BP
GO:0009791 post-embryonic development BP
GO:0009826 unidimensional cell growth BP
GO:0009889 regulation of biosynthetic process BP
GO:0009909 regulation of flower development BP
GO:0009987 cellular process BP
GO:0010017 red or far-red light signaling pathway BP
GO:0010031 circumnutation BP
GO:0010033 response to organic substance BP
GO:0010119 regulation of stomatal movement BP
GO:0010228 vegetative to reproductive phase transition of meristem BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0016043 cellular component organization BP
GO:0016049 cell growth BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022414 reproductive process BP
GO:0023052 signaling BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0033993 response to lipid BP
GO:0040007 growth BP
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048511 rhythmic process BP
GO:0048573 photoperiodism, flowering BP
GO:0048580 regulation of post-embryonic development BP
GO:0048589 developmental growth BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050879 multicellular organismal movement BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051606 detection of stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060560 developmental growth involved in morphogenesis BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071489 cellular response to red or far red light BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0097305 response to alcohol BP
GO:0104004 cellular response to environmental stimulus BP
GO:0140110 transcription regulator activity MF
GO:1901700 response to oxygen-containing compound BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000241 regulation of reproductive process BP
GO:2001141 regulation of RNA biosynthetic process BP
KEGG Term Name Description
map04712 Circadian rhythm - plant -