Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000152060
View in Genome Browser
Position
Contig2833:60646-63289 (+)
2643bp
Gene Type
gene
Gene Description (Protein Product)
Protein of unknown function (DUF1092)
Organism
Fraxinus excelsior
Also AS AT3G08010

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000191870 Domain of unknown function (DUF1995)
FRAEX38873_v2_000314740 Belongs to the universal ribosomal protein uL11 family
FRAEX38873_v2_000329770 Tetratricopeptide repeat
Regulatory gene
FRAEX38873_v2_000000110 GAGA binding protein-like family
FRAEX38873_v2_000001190 Stress-associated protein
FRAEX38873_v2_000001820 HD-ZIP protein N terminus

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006091 generation of precursor metabolites and energy BP
GO:0006412 translation BP
GO:0006518 peptide metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009628 response to abiotic stimulus BP
GO:0009639 response to red or far red light BP
GO:0009640 photomorphogenesis BP
GO:0009657 plastid organization BP
GO:0009658 chloroplast organization BP
GO:0009704 de-etiolation BP
GO:0009791 post-embryonic development BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0015979 photosynthesis BP
GO:0016043 cellular component organization BP
GO:0019538 protein metabolic process BP
GO:0019684 photosynthesis, light reaction BP
GO:0022607 cellular component assembly BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034622 protein-containing complex assembly BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0043043 peptide biosynthetic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048564 photosystem I assembly BP
GO:0048856 anatomical structure development BP
GO:0050896 response to stimulus BP
GO:0065003 protein-containing complex assembly BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP