Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000174850
View in Genome Browser
Position
Contig3213:63511-67825 (-)
4314bp
Gene Type
gene
Gene Description (Protein Product)
Phd finger protein
Organism
Fraxinus excelsior
Also AS AT1G54390

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000218920 DNA methyltransferase 1-associated protein
FRAEX38873_v2_000309200 DNA methyltransferase 1-associated protein
FRAEX38873_v2_000318000 Belongs to the actin family
Regulatory gene
FRAEX38873_v2_000001190 Stress-associated protein
FRAEX38873_v2_000005550 Stress-associated protein
FRAEX38873_v2_000008150 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0035064 methylated histone binding MF
GO:0042393 histone binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0140030 modification-dependent protein binding MF
GO:0140034 methylation-dependent protein binding MF