Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000198390
View in Genome Browser
Position
Contig3636:16646-19374 (-)
2728bp
Gene Type
gene
Gene Description (Protein Product)
SPIRAL1-like
Organism
Fraxinus excelsior
Also AS AT1G26355

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
FRAEX38873_v2_000008150 Dof zinc finger protein
FRAEX38873_v2_000026520 dof zinc finger protein
FRAEX38873_v2_000058390 Dof zinc finger protein DOF4.6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000226 microtubule cytoskeleton organization BP
GO:0000902 cell morphogenesis BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005819 spindle CC
GO:0005856 cytoskeleton CC
GO:0005874 microtubule CC
GO:0005876 spindle microtubule CC
GO:0005881 cytoplasmic microtubule CC
GO:0005938 cell cortex CC
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0008150 biological_process BP
GO:0009524 phragmoplast CC
GO:0009574 preprophase band CC
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009826 unidimensional cell growth BP
GO:0009987 cellular process BP
GO:0010005 cortical microtubule, transverse to long axis CC
GO:0015630 microtubule cytoskeleton CC
GO:0016043 cellular component organization BP
GO:0016049 cell growth BP
GO:0030863 cortical cytoskeleton CC
GO:0030865 cortical cytoskeleton organization BP
GO:0030981 cortical microtubule cytoskeleton CC
GO:0031122 cytoplasmic microtubule organization BP
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0033554 cellular response to stress BP
GO:0040007 growth BP
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043622 cortical microtubule organization BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044448 obsolete cell cortex part CC
GO:0044464 obsolete cell part CC
GO:0048589 developmental growth BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050896 response to stimulus BP
GO:0051211 anisotropic cell growth BP
GO:0051716 cellular response to stimulus BP
GO:0055028 cortical microtubule CC
GO:0060560 developmental growth involved in morphogenesis BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071470 cellular response to osmotic stress BP
GO:0071472 cellular response to salt stress BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0097435 supramolecular fiber organization BP
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0099568 cytoplasmic region CC
GO:0104004 cellular response to environmental stimulus BP