Basic Information
Gene ID
FRAEX38873_v2_000199500
Position
Contig3655:23347-26931 (-)
3584bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
"Serine-threonine protein kinase
Organism
Also AS AT5G46330

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000374800 cyclic nucleotide-gated ion channel
FRAEX38873_v2_000339910 cyclic nucleotide-gated ion channel
FRAEX38873_v2_000245190 Cyclic nucleotide-monophosphate binding domain
Regulatory gene
FRAEX38873_v2_000001740 (NAC) domain-containing protein
FRAEX38873_v2_000001820 HD-ZIP protein N terminus
FRAEX38873_v2_000002120 B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map04626 Plant-pathogen interaction Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.