Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000206140
View in Genome Browser
Position
Contig3788:106156-115780 (+)
9624bp
Gene Type
gene
Gene Description (Protein Product)
Tetratricopeptide repeat
Organism
Fraxinus excelsior
Also AS AT4G20900

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000262860 Tetratricopeptide repeat
FRAEX38873_v2_000262780 KR domain
FRAEX38873_v2_000303190 Telomerase activating protein Est1
Regulatory gene
FRAEX38873_v2_000010330 WRKY transcription factor
FRAEX38873_v2_000032080 WRKY Transcription Factor
FRAEX38873_v2_000048050 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000280 nuclear division BP
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006996 organelle organization BP
GO:0007049 cell cycle BP
GO:0007140 male meiotic nuclear division BP
GO:0007275 multicellular organism development BP
GO:0007276 gamete generation BP
GO:0008150 biological_process BP
GO:0009555 pollen development BP
GO:0009556 microsporogenesis BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0019953 sexual reproduction BP
GO:0022402 cell cycle process BP
GO:0022412 cellular process involved in reproduction in multicellular organism BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0034293 sexual sporulation BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043934 sporulation BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0048229 gametophyte development BP
GO:0048232 male gamete generation BP
GO:0048236 plant-type sporogenesis BP
GO:0048285 organelle fission BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0051321 meiotic cell cycle BP
GO:0051704 obsolete multi-organism process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0140013 meiotic nuclear division BP
GO:1903046 meiotic cell cycle process BP