Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000276490
View in Genome Browser
Position
Contig543:161843-166075 (+)
4232bp
Gene Type
gene
Gene Description (Protein Product)
Pectate lyase
Organism
Fraxinus excelsior
Also AS AT3G55140

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000322950 Pectate lyase superfamily protein
FRAEX38873_v2_000337330 Belongs to the glycosyl hydrolase 28 family
FRAEX38873_v2_000386840 Glycosyl hydrolases family 28
Regulatory gene
FRAEX38873_v2_000006700 MYB-CC type transfactor, LHEQLE motif
FRAEX38873_v2_000018390 Protein tesmin TSO1-like CXC 5
FRAEX38873_v2_000027760 tesmin TSO1-like CXC

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -