Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000283100
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Position
Contig55851:283-601 (-)
318bp
Gene Type
gene
Gene Description (Protein Product)
"component of the eukaryotic translation initiation factor 3 (eIF-3) complex
Organism
Fraxinus excelsior
Also AS AT2G46290

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000379320 DNA damage-binding protein
FRAEX38873_v2_000389460 Belongs to the protein kinase superfamily. Ser Thr protein kinase family
FRAEX38873_v2_000309630 Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Regulatory gene
FRAEX38873_v2_000002120 B3 DNA binding domain
FRAEX38873_v2_000013220 CW-type Zinc Finger
FRAEX38873_v2_000027480 zinc finger binding to DNA consensus sequence [AT]GATA[AG]

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000151 ubiquitin ligase complex CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0008150 biological_process BP
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0031461 cullin-RING ubiquitin ligase complex CC
GO:0032991 protein-containing complex CC
GO:0042221 response to chemical BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046686 response to cadmium ion BP
GO:0050896 response to stimulus BP
GO:0080008 Cul4-RING E3 ubiquitin ligase complex CC
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC