Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000285460
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Position
Contig5635:26972-31198 (-)
4226bp
Gene Type
gene
Gene Description (Protein Product)
Inorganic pyrophosphatase
Organism
Fraxinus excelsior
Also AS AT3G53620

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000389190 ATP synthase delta (OSCP) subunit
FRAEX38873_v2_000400400 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FRAEX38873_v2_000384400 V-type proton ATPase subunit
Regulatory gene
FRAEX38873_v2_000008150 Dof zinc finger protein
FRAEX38873_v2_000026520 dof zinc finger protein
FRAEX38873_v2_000058390 Dof zinc finger protein DOF4.6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0008150 biological_process BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0042221 response to chemical BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046686 response to cadmium ion BP
GO:0050896 response to stimulus BP
KEGG Term Name Description
map00190 Oxidative phosphorylation -