Basic Information
Gene ID
FRAEX38873_v2_000286620
Position
Contig5668:16573-24560 (+)
7987bp
Gene Type
gene
Gene Description (Protein Product)
Ribonuclease P protein subunit p25-like
Organism
Also AS AT1G20220AT1G76010

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000300380 WD domain, G-beta repeat
FRAEX38873_v2_000312690 WD domain, G-beta repeat
FRAEX38873_v2_000355390 Gar1/Naf1 RNA binding region
Regulatory gene
FRAEX38873_v2_000000110 GAGA binding protein-like family
FRAEX38873_v2_000001190 Stress-associated protein
FRAEX38873_v2_000005550 Stress-associated protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03008 Ribosome biogenesis in eukaryotes Ribosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It requires hundreds of factors not present in the mature particle. In the absence of these proteins, ribosome biogenesis is stalled and cell growth is terminated even under optimal growth conditions. The primary pre-rRNA transcript is assembled into the 90S pre-ribosome, which contains both 40S and 60S assembly factors. Within this complex, the pre-rRNA is cleaved. pre-60S ribosomes are subjected to several sequential processing steps in the nucleoplasm involving numerous assembly intermediates before it is exported to the cytoplasm and matured into the 60S ribosomal subunit. The pre-40S ribosome is matured to the small ribosomal subunit in the cytoplasm by cleavage.