Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
FRAEX38873_v2_000290970
View in Genome Browser
Position
Contig5781:12516-24785 (-)
12269bp
Gene Type
gene
Gene Description (Protein Product)
Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Organism
Fraxinus excelsior
Also AS AT5G37020AT1G30330

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000298870 Belongs to the GRAS family
FRAEX38873_v2_000353260 Belongs to the 14-3-3 family
FRAEX38873_v2_000341850 Belongs to the 14-3-3 family
Regulatory gene
FRAEX38873_v2_000008150 Dof zinc finger protein
FRAEX38873_v2_000026520 dof zinc finger protein
FRAEX38873_v2_000058390 Dof zinc finger protein DOF4.6-like
Target gene
FRAEX38873_v2_000000730 Belongs to the protein kinase superfamily
FRAEX38873_v2_000001050 Protein of unknown function (DUF4005)
FRAEX38873_v2_000001650 Heat shock factor-binding protein 1-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)