Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000326620
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Position
Contig690:134756-148864 (+)
14108bp
Gene Type
gene
Gene Description (Protein Product)
Structural maintenance of
Organism
Fraxinus excelsior
Also AS AT5G48600

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000379620 Structural maintenance of chromosomes protein
FRAEX38873_v2_000347840 Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases
FRAEX38873_v2_000371850 Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000070 mitotic sister chromatid segregation BP
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0000819 sister chromatid segregation BP
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006323 chromosome organization BP
GO:0006996 organelle organization BP
GO:0007049 cell cycle BP
GO:0007059 chromosome segregation BP
GO:0007076 mitotic chromosome condensation BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009987 cellular process BP
GO:0010154 fruit development BP
GO:0016043 cellular component organization BP
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0030261 chromosome condensation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048285 organelle fission BP
GO:0048316 seed development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0051276 chromosome organization BP
GO:0061458 reproductive system development BP
GO:0071103 DNA conformation change BP
GO:0071840 cellular component organization or biogenesis BP
GO:0098813 nuclear chromosome segregation BP
GO:0140014 mitotic nuclear division BP
GO:1903047 mitotic cell cycle process BP