Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000334300
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Position
Contig7197:3113-9358 (+)
6245bp
Gene Type
gene
Gene Description (Protein Product)
Tetratricopeptide repeat
Organism
Fraxinus excelsior
Also AS AT5G21990

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000392290 heat shock
FRAEX38873_v2_000341770 GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis
FRAEX38873_v2_000383100 Belongs to the heat shock protein 70 family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0005829 cytosol CC
GO:0006810 transport BP
GO:0008150 biological_process BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009527 plastid outer membrane CC
GO:0009536 plastid CC
GO:0009707 chloroplast outer membrane CC
GO:0009941 chloroplast envelope CC
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0019867 outer membrane CC
GO:0031090 organelle membrane CC
GO:0031967 organelle envelope CC
GO:0031968 organelle outer membrane CC
GO:0031969 chloroplast membrane CC
GO:0031975 envelope CC
GO:0031984 organelle subcompartment CC
GO:0042170 plastid membrane CC
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046907 intracellular transport BP
GO:0046967 cytosol to endoplasmic reticulum transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:0098827 endoplasmic reticulum subcompartment CC