Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000335300
View in Genome Browser
Position
Contig72301:427-911 (+)
484bp
Gene Type
gene
Gene Description (Protein Product)
Nitric oxide
Organism
Fraxinus excelsior
Also AS AT3G47450

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000388970 EF-hand domain
FRAEX38873_v2_000352310 Calcium-binding protein CML23
FRAEX38873_v2_000379560 Belongs to the arginase family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000302 response to reactive oxygen species BP
GO:0001101 response to acid chemical BP
GO:0001505 regulation of neurotransmitter levels BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003924 GTPase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0006109 regulation of carbohydrate metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006809 nitric oxide biosynthetic process BP
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0006979 response to oxidative stress BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009657 plastid organization BP
GO:0009668 plastid membrane organization BP
GO:0009889 regulation of biosynthetic process BP
GO:0009987 cellular process BP
GO:0010027 thylakoid membrane organization BP
GO:0010035 response to inorganic substance BP
GO:0010193 response to ozone BP
GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway BP
GO:0010565 regulation of cellular ketone metabolic process BP
GO:0010675 regulation of cellular carbohydrate metabolic process BP
GO:0016043 cellular component organization BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0017144 xenobiotic metabolic process BP
GO:0019216 regulation of lipid metabolic process BP
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019747 regulation of isoprenoid metabolic process BP
GO:0022613 ribonucleoprotein complex biogenesis BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042133 neurotransmitter metabolic process BP
GO:0042136 neurotransmitter biosynthetic process BP
GO:0042221 response to chemical BP
GO:0042254 ribosome biogenesis BP
GO:0042493 response to xenobiotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046209 nitric oxide metabolic process BP
GO:0046677 response to antibiotic BP
GO:0046890 regulation of lipid biosynthetic process BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051246 regulation of protein metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061024 membrane organization BP
GO:0062012 regulation of small molecule metabolic process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071071 regulation of phospholipid biosynthetic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072593 reactive oxygen species metabolic process BP
GO:0080090 regulation of primary metabolic process BP
GO:0099402 plant organ development BP
GO:1901700 response to oxygen-containing compound BP
GO:1903409 reactive oxygen species biosynthetic process BP
GO:1903725 regulation of phospholipid metabolic process BP
GO:2001057 reactive nitrogen species metabolic process BP
KEGG Term Name Description
map04626 Plant-pathogen interaction Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00330 Arginine and proline metabolism -