Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000361790
View in Genome Browser
Position
Contig8276:16411-28825 (-)
12414bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the protein kinase superfamily
Organism
Fraxinus excelsior
Also AS AT3G48750

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000366970 Belongs to the cyclin family
FRAEX38873_v2_000384550 Cyclin
FRAEX38873_v2_000383100 Belongs to the heat shock protein 70 family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000226 microtubule cytoskeleton organization BP
GO:0000278 mitotic cell cycle BP
GO:0000281 mitotic cytokinesis BP
GO:0000910 cytokinesis BP
GO:0000911 cytokinesis by cell plate formation BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004672 protein kinase activity MF
GO:0004674 protein serine/threonine kinase activity MF
GO:0004693 cyclin-dependent protein serine/threonine kinase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005819 spindle CC
GO:0005829 cytosol CC
GO:0005856 cytoskeleton CC
GO:0005874 microtubule CC
GO:0005881 cytoplasmic microtubule CC
GO:0005886 plasma membrane CC
GO:0005938 cell cortex CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006260 DNA replication BP
GO:0006261 DNA-templated DNA replication BP
GO:0006281 DNA repair BP
GO:0006325 chromatin organization BP
GO:0006464 protein modification process BP
GO:0006468 protein phosphorylation BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007049 cell cycle BP
GO:0007275 multicellular organism development BP
GO:0007346 regulation of mitotic cell cycle BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008284 positive regulation of cell population proliferation BP
GO:0008356 asymmetric cell division BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009555 pollen development BP
GO:0009574 preprophase band CC
GO:0009628 response to abiotic stimulus BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010005 cortical microtubule, transverse to long axis CC
GO:0010154 fruit development BP
GO:0010235 guard mother cell cytokinesis BP
GO:0010374 stomatal complex development BP
GO:0010440 stomatal lineage progression BP
GO:0010444 guard mother cell differentiation BP
GO:0010468 regulation of gene expression BP
GO:0010564 regulation of cell cycle process BP
GO:0015630 microtubule cytoskeleton CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016569 obsolete covalent chromatin modification BP
GO:0016570 histone modification BP
GO:0016572 obsolete histone phosphorylation BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016773 phosphotransferase activity, alcohol group as acceptor MF
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0030154 cell differentiation BP
GO:0030863 cortical cytoskeleton CC
GO:0030981 cortical microtubule cytoskeleton CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032506 cytokinetic process BP
GO:0033043 regulation of organelle organization BP
GO:0033554 cellular response to stress BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0036211 protein modification process BP
GO:0040020 regulation of meiotic nuclear division BP
GO:0042023 DNA endoreduplication BP
GO:0042127 regulation of cell population proliferation BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044448 obsolete cell cortex part CC
GO:0044464 obsolete cell part CC
GO:0044770 cell cycle phase transition BP
GO:0044772 mitotic cell cycle phase transition BP
GO:0044786 cell cycle DNA replication BP
GO:0046483 heterocycle metabolic process BP
GO:0048229 gametophyte development BP
GO:0048316 seed development BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051128 regulation of cellular component organization BP
GO:0051276 chromosome organization BP
GO:0051301 cell division BP
GO:0051445 regulation of meiotic cell cycle BP
GO:0051716 cellular response to stimulus BP
GO:0051726 regulation of cell cycle BP
GO:0051783 regulation of nuclear division BP
GO:0055028 cortical microtubule CC
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0061640 cytoskeleton-dependent cytokinesis BP
GO:0065007 biological regulation BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072686 mitotic spindle CC
GO:0090304 nucleic acid metabolic process BP
GO:0090558 plant epidermis development BP
GO:0090627 plant epidermal cell differentiation BP
GO:0097472 cyclin-dependent protein kinase activity MF
GO:0098725 symmetric cell division BP
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0099568 cytoplasmic region CC
GO:0140096 catalytic activity, acting on a protein MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901987 regulation of cell cycle phase transition BP
GO:1902410 mitotic cytokinetic process BP
GO:1902806 regulation of cell cycle G1/S phase transition BP
GO:1903047 mitotic cell cycle process BP
GO:2000241 regulation of reproductive process BP