Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000377920
View in Genome Browser
Position
Contig8902:60006-72100 (+)
12094bp
Gene Type
gene
Gene Description (Protein Product)
Ubiquitin-2 like Rad60 SUMO-like
Organism
Fraxinus excelsior
Also AS AT5G42220

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000396810 seed storage protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000280 nuclear division BP
GO:0001655 urogenital system development BP
GO:0001822 kidney development BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006464 protein modification process BP
GO:0006473 protein acetylation BP
GO:0006475 internal protein amino acid acetylation BP
GO:0006508 proteolysis BP
GO:0006511 ubiquitin-dependent protein catabolic process BP
GO:0006515 protein quality control for misfolded or incompletely synthesized proteins BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006915 apoptotic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0006996 organelle organization BP
GO:0007029 endoplasmic reticulum organization BP
GO:0007049 cell cycle BP
GO:0007059 chromosome segregation BP
GO:0007127 meiosis I BP
GO:0007129 homologous chromosome pairing at meiosis BP
GO:0007130 synaptonemal complex assembly BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007275 multicellular organism development BP
GO:0007276 gamete generation BP
GO:0007283 spermatogenesis BP
GO:0007399 nervous system development BP
GO:0007417 central nervous system development BP
GO:0007420 brain development BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008219 cell death BP
GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009894 regulation of catabolic process BP
GO:0009895 negative regulation of catabolic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010243 response to organonitrogen compound BP
GO:0010256 endomembrane system organization BP
GO:0010498 proteasomal protein catabolic process BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010941 regulation of cell death BP
GO:0012501 programmed cell death BP
GO:0016043 cellular component organization BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018205 peptidyl-lysine modification BP
GO:0018393 internal peptidyl-lysine acetylation BP
GO:0018394 peptidyl-lysine acetylation BP
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0019941 modification-dependent protein catabolic process BP
GO:0019953 sexual reproduction BP
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0023052 signaling BP
GO:0030162 regulation of proteolysis BP
GO:0030163 protein catabolic process BP
GO:0030323 respiratory tube development BP
GO:0030324 lung development BP
GO:0030433 ubiquitin-dependent ERAD pathway BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031329 regulation of cellular catabolic process BP
GO:0031330 negative regulation of cellular catabolic process BP
GO:0031593 polyubiquitin modification-dependent protein binding MF
GO:0031647 regulation of protein stability BP
GO:0032268 regulation of protein metabolic process BP
GO:0032269 negative regulation of protein metabolic process BP
GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process BP
GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0033554 cellular response to stress BP
GO:0034613 protein localization BP
GO:0034976 response to endoplasmic reticulum stress BP
GO:0035295 tube development BP
GO:0035556 intracellular signal transduction BP
GO:0035966 response to topologically incorrect protein BP
GO:0035967 cellular response to topologically incorrect protein BP
GO:0036211 protein modification process BP
GO:0036503 ERAD pathway BP
GO:0042176 regulation of protein catabolic process BP
GO:0042177 negative regulation of protein catabolic process BP
GO:0042221 response to chemical BP
GO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator BP
GO:0042981 regulation of apoptotic process BP
GO:0043021 ribonucleoprotein complex binding MF
GO:0043022 ribosome binding MF
GO:0043067 regulation of programmed cell death BP
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0043543 protein acylation BP
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044445 obsolete cytosolic part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0044877 protein-containing complex binding MF
GO:0045048 protein insertion into ER membrane BP
GO:0045132 meiotic chromosome segregation BP
GO:0045143 homologous chromosome segregation BP
GO:0045184 establishment of protein localization BP
GO:0045861 negative regulation of proteolysis BP
GO:0045995 regulation of embryonic development BP
GO:0048232 male gamete generation BP
GO:0048285 organelle fission BP
GO:0048513 animal organ development BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050821 protein stabilization BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051179 localization BP
GO:0051205 protein insertion into membrane BP
GO:0051234 establishment of localization BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051248 negative regulation of protein metabolic process BP
GO:0051276 chromosome organization BP
GO:0051321 meiotic cell cycle BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0051641 cellular localization BP
GO:0051704 obsolete multi-organism process BP
GO:0051716 cellular response to stimulus BP
GO:0051788 response to misfolded protein BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060322 head development BP
GO:0060541 respiratory system development BP
GO:0061024 membrane organization BP
GO:0061136 regulation of proteasomal protein catabolic process BP
GO:0061857 endoplasmic reticulum stress-induced pre-emptive quality control BP
GO:0061982 meiosis I cell cycle process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070059 intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress BP
GO:0070192 chromosome organization involved in meiotic cell cycle BP
GO:0070193 synaptonemal complex organization BP
GO:0070628 proteasome binding MF
GO:0070727 cellular macromolecule localization BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071218 cellular response to misfolded protein BP
GO:0071310 cellular response to organic substance BP
GO:0071704 organic substance metabolic process BP
GO:0071712 ER-associated misfolded protein catabolic process BP
GO:0071816 tail-anchored membrane protein insertion into ER membrane BP
GO:0071818 BAT3 complex CC
GO:0071840 cellular component organization or biogenesis BP
GO:0072001 renal system development BP
GO:0072331 signal transduction by p53 class mediator BP
GO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator BP
GO:0072379 ER membrane insertion complex CC
GO:0072657 protein localization to membrane BP
GO:0080090 regulation of primary metabolic process BP
GO:0090150 establishment of protein localization to membrane BP
GO:0097190 apoptotic signaling pathway BP
GO:0097193 intrinsic apoptotic signaling pathway BP
GO:0098813 nuclear chromosome segregation BP
GO:0140013 meiotic nuclear division BP
GO:0140030 modification-dependent protein binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1901698 response to nitrogen compound BP
GO:1901799 negative regulation of proteasomal protein catabolic process BP
GO:1903046 meiotic cell cycle process BP
GO:1903050 regulation of proteolysis involved in protein catabolic process BP
GO:1903051 negative regulation of proteolysis involved in protein catabolic process BP
GO:1903362 regulation of protein catabolic process BP
GO:1903363 negative regulation of protein catabolic process BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000058 regulation of ubiquitin-dependent protein catabolic process BP
GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process BP