PPGR - Gene Detail

Basic Information

Gene ID	FRAEX38873_v2_000384590 View in Genome Browser
Position	Contig92:138518-140585 (-) 2067bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Organism	Fraxinus excelsior
Also AS	AT1G05260

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

FRAEX38873_v2_000384980 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

FRAEX38873_v2_000395350 Alcohol dehydrogenase GroES-like domain

FRAEX38873_v2_000394030 Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0001101	response to acid chemical	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004601	peroxidase activity	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005911	cell-cell junction	CC
GO:0006950	response to stress	BP
GO:0006970	response to osmotic stress	BP
GO:0006972	hyperosmotic response	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009266	response to temperature stimulus	BP
GO:0009269	response to desiccation	BP
GO:0009409	response to cold	BP
GO:0009414	response to water deprivation	BP
GO:0009415	response to water	BP
GO:0009505	plant-type cell wall	CC
GO:0009506	plasmodesma	CC
GO:0009628	response to abiotic stimulus	BP
GO:0009636	response to toxic substance	BP
GO:0009651	response to salt stress	BP
GO:0009664	plant-type cell wall organization	BP
GO:0009987	cellular process	BP
GO:0010035	response to inorganic substance	BP
GO:0012505	endomembrane system	CC
GO:0016043	cellular component organization	BP
GO:0016209	antioxidant activity	MF
GO:0016491	oxidoreductase activity	MF
GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	MF
GO:0030054	cell junction	CC
GO:0030312	external encapsulating structure	CC
GO:0042221	response to chemical	BP
GO:0042538	hyperosmotic salinity response	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045229	external encapsulating structure organization	BP
GO:0050896	response to stimulus	BP
GO:0051716	cellular response to stimulus	BP
GO:0055044	symplast	CC
GO:0055114	obsolete oxidation-reduction process	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071554	cell wall organization or biogenesis	BP
GO:0071555	cell wall organization	BP
GO:0071669	plant-type cell wall organization or biogenesis	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0097237	cellular response to toxic substance	BP
GO:0098754	detoxification	BP
GO:0098869	cellular oxidant detoxification	BP
GO:1901700	response to oxygen-containing compound	BP
GO:1990748	cellular detoxification	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.