PPGR - Gene Detail

Basic Information

Gene ID	FRAEX38873_v2_000401110 View in Genome Browser
Position	Mt25:19779-20421 (-) 642bp
Gene Type	gene
Gene Description (Protein Product)	"Respiratory-chain NADH dehydrogenase
Organism	Fraxinus excelsior
Also AS	ATMG00070

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

FRAEX38873_v2_000401300 Proton-conducting membrane transporter

FRAEX38873_v2_000401320 Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone

FRAEX38873_v2_000401160 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0003954	NADH dehydrogenase activity	MF
GO:0008137	NADH dehydrogenase (ubiquinone) activity	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016651	oxidoreductase activity, acting on NAD(P)H	MF
GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	MF
GO:0050136	NADH dehydrogenase (quinone) activity	MF
GO:0055114	obsolete oxidation-reduction process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00190	Oxidative phosphorylation	-