Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ginchr1.1188
View in Genome Browser
Position
GWHBAVD00000001:410930687-410930956 (-)
269bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the Casparian strip membrane proteins (CASP) family
Organism
Ginkgo biloba
Also AS AT3G16300evm.TU.chr1.1188

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr9.1615 acyl-CoA-binding protein
Ginchr7.1330 Protein trichome birefringence-like 18
Regulatory gene
Ginchr1.1425 DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Ginchr1.176 Transcription factor
Ginchr1.2192 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0048037 obsolete cofactor binding MF
GO:0051536 iron-sulfur cluster binding MF
GO:0051540 metal cluster binding MF