Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Ginchr1.158
View in Genome Browser
Position
GWHBAVD00000001:46075408-46081236 (-)
5828bp
Gene Type
gene
Gene Description (Protein Product)
transcription factor
Organism
Ginkgo biloba
Also AS AT1G32240evm.TU.chr1.158

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr10.423 ultrapetala
Ginchr8.1773 ultrapetala
Ginchr5.1854 ultrapetala
Regulatory gene
Ginchr1.1198 Zinc finger protein
Ginchr1.1316 Homeobox protein knotted-1-like
Ginchr1.1560 Protein BASIC PENTACYSTEINE6-like
Target gene
Ginchr1.1015 Belongs to the DEAD box helicase family
Ginchr1.1032
Ginchr1.1042 Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)