Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ginchr1.1983
View in Genome Browser
Position
GWHBAVD00000001:674492908-674495397 (-)
2489bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the GRAS family
Organism
Ginkgo biloba
Also AS AT2G01570evm.TU.chr1.1983

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr10.1412 transcription factor
Ginchr11.1717 transcription factor
Ginchr4.2124 transcription factor
Regulatory gene
Ginchr1.1198 Zinc finger protein
Ginchr1.1316 Homeobox protein knotted-1-like
Ginchr1.1713 Zinc finger protein
Target gene
Ginchr1.1003 Phytoene synthase
Ginchr1.1023 UBA and UBX domain-containing protein
Ginchr1.1042 Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map04075 Plant hormone signal transduction -