Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ginchr10.40
View in Genome Browser
Position
GWHBAVD00000002:8415456-8516506 (+)
101050bp
Gene Type
gene
Gene Description (Protein Product)
Werner syndrome-like exonuclease
Organism
Ginkgo biloba
Also AS AT4G13870evm.TU.chr10.40

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr2.1865 Belongs to the helicase family. RecQ subfamily
Ginchr2.686 ATP-dependent DNA helicase 2 subunit
Ginchr9.1286 ATP-dependent DNA helicase 2 subunit
Regulatory gene
Ginchr1.1346 Transporter associated domain
Ginchr1.1959 Heat Stress Transcription Factor
Ginchr1.2311 Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004518 nuclease activity MF
GO:0004527 exonuclease activity MF
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008408 3'-5' exonuclease activity MF
GO:0009987 cellular process BP
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:0090305 nucleic acid phosphodiester bond hydrolysis BP
GO:1901360 organic cyclic compound metabolic process BP