Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ginchr2.1842
View in Genome Browser
Position
GWHBAVD00000004:645866507-645872229 (-)
5722bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the peptidase C1 family
Organism
Ginkgo biloba
Also AS AT3G45310evm.TU.chr2.1842

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr3.655 Vacuolar-sorting receptor
Ginchr3.656 Vacuolar-sorting receptor
Ginchr4.678 Leucine aminopeptidase 2
Regulatory gene
Ginchr1.1044 Transcription factor
Ginchr1.1358 MADS-box transcription factor 6
Ginchr1.1364 MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000323 lytic vacuole CC
GO:0002376 immune system process BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004175 endopeptidase activity MF
GO:0004197 cysteine-type endopeptidase activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005615 extracellular space CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005764 lysosome CC
GO:0005773 vacuole CC
GO:0006508 proteolysis BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006955 immune response BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0008234 cysteine-type peptidase activity MF
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009987 cellular process BP
GO:0016787 hydrolase activity MF
GO:0019538 protein metabolic process BP
GO:0030163 protein catabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044421 obsolete extracellular region part CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0070011 peptidase activity MF
GO:0071704 organic substance metabolic process BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP