Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ginchr2.2119
View in Genome Browser
Position
GWHBAVD00000004:762853181-762945121 (-)
91940bp
Gene Type
gene
Gene Description (Protein Product)
transcription factor
Organism
Ginkgo biloba
Also AS AT3G12250evm.TU.chr2.2119

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr5.1740 protein disulfide oxidoreductase activity
Ginchr6.2058 Belongs to the GRAS family
Ginchr7.1624 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Acts redundantly with BOP2. BOP1 2 promote leaf and floral meristem fate and determinacy in a pathway targeting AP1 and AGL24. BOP1 2 act as transcriptional co- regulators through direct interaction with TGA factors, including PAN, a direct regulator of AP1. Controls lateral organ fate through positive regulation of adaxial-abaxial polarity genes ATHB-14 PHB, YAB1 FIL and YAB3, and through positive regulation of LOB domain-containing genes LOB, LBD6 AS2 and LBD36. Promotes and maintains a developmentally determinate state in leaf cells through the negative regulation of JAG, JGL and class I KNOX genes. Is also involved in nectary development, formation of normal abscission zones and suppression of bract formation
Regulatory gene
Ginchr1.1198 Zinc finger protein
Ginchr1.1308 homeobox-leucine zipper protein
Ginchr1.1425 DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Target gene
Ginchr1.1 Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Ginchr1.1000 isoform X1
Ginchr1.1002 Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map04075 Plant hormone signal transduction -