PPGR - Gene Detail

Basic Information

Gene ID	Ginchr3.1288 View in Genome Browser
Position	GWHBAVD00000005:385588652-385590446 (+) 1794bp
Gene Type	gene
Gene Description (Protein Product)	Cytochrome b6-f complex iron-sulfur subunit
Organism	Ginkgo biloba
Also AS	AT4G03280evm.TU.chr3.1288

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Ginctg20470.1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis

Ginchr7.1424 cytochrome b6

Ginchr7.430 Photosystem I reaction center subunit III

Regulatory gene

Ginchr1.1425 DNA-binding domain in plant proteins such as APETALA2 and EREBPs

Ginchr1.2482 Cyclic dof factor

Ginchr1.3284 AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

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Pathway

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00195	Photosynthesis	Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.