Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ginchr5.1299
View in Genome Browser
Position
GWHBAVD00000007:472483553-472484583 (-)
1030bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the Casparian strip membrane proteins (CASP) family
Organism
Ginkgo biloba
Also AS AT4G15610evm.TU.chr5.1299

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr7.1069 Mis12 protein
Ginchr9.432 Histidine biosynthesis bifunctional protein (HISIE)
Ginchr5.591 DNA repair protein
Regulatory gene
Ginchr1.1044 Transcription factor
Ginchr1.1346 Transporter associated domain
Ginchr1.1425 DNA-binding domain in plant proteins such as APETALA2 and EREBPs

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0009506 plasmodesma CC
GO:0016020 membrane CC
GO:0019899 enzyme binding MF
GO:0019900 kinase binding MF
GO:0019901 protein kinase binding MF
GO:0030054 cell junction CC
GO:0043424 protein histidine kinase binding MF
GO:0044464 obsolete cell part CC
GO:0048037 obsolete cofactor binding MF
GO:0051536 iron-sulfur cluster binding MF
GO:0051540 metal cluster binding MF
GO:0055044 symplast CC
GO:0071944 cell periphery CC