PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Gene ID	Ginchr5.1608 View in Genome Browser
Position	GWHBAVD00000007:570340311-570341569 (+) 1258bp
Gene Type	gene
Gene Description (Protein Product)	"Hydrolase
Organism	Ginkgo biloba
Also AS	AT5G21950evm.TU.chr5.1608

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Ginchr5.993 Belongs to the glycosyl hydrolase 9 (cellulase E) family Ginchr9.1649 Belongs to the DHHC palmitoyltransferase family Ginchr7.1440 Biotin carboxylase C-terminal domain
Regulatory gene	Ginchr1.1195 Transcription factor Ginchr1.1578 transcription factor Ginchr1.2879 Transcription factor RF2b

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0008150	biological_process	BP
GO:0016020	membrane	CC
GO:0016787	hydrolase activity	MF
GO:0016822	hydrolase activity, acting on acid carbon-carbon bonds	MF
GO:0016823	hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances	MF
GO:0030312	external encapsulating structure	CC
GO:0034820	4,9-DSHA hydrolase activity	MF
GO:0040007	growth	BP
GO:0044110	obsolete growth involved in symbiotic interaction	BP
GO:0044116	biological process involved in interaction with host	BP
GO:0044117	biological process involved in interaction with host	BP
GO:0044403	biological process involved in symbiotic interaction	BP
GO:0044419	biological process involved in interspecies interaction between organisms	BP
GO:0044464	obsolete cell part	CC
GO:0051704	obsolete multi-organism process	BP
GO:0071944	cell periphery	CC