Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Ginchr6.1376
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Position
GWHBAVD00000008:422494447-422829762 (-)
335315bp
Gene Type
gene
Gene Description (Protein Product)
Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs
Organism
Ginkgo biloba
Also AS AT5G01230evm.TU.chr6.1376

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr7.83 Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit
Ginchr6.591 Putative RNA methylase family UPF0020
Ginchr6.959 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit
Regulatory gene
Ginchr1.1413 Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
Ginchr1.1425 DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Ginchr1.176 Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)