Basic Information
Gene ID
Position
GWHBAVD00000008:163565748-163567486 (-)
1738bp
Gene Type
gene
Gene Description (Protein Product)
Photosystem II 10 kDa polypeptide
Organism
Also AS AT1G79040evm.TU.chr6.652

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr9.1844 oxygen-evolving enhancer protein
Ginchr9.1502 Photosystem I reaction center subunit
Ginchr8.241 The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
Regulatory gene
Ginchr1.1308 homeobox-leucine zipper protein
Ginchr1.1488 homeobox-leucine zipper protein
Ginchr1.1616 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00195 Photosynthesis Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.