Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ginchr6.753
View in Genome Browser
Position
GWHBAVD00000008:215311384-215345981 (+)
34597bp
Gene Type
gene
Gene Description (Protein Product)
stem vascular tissue pattern formation
Organism
Ginkgo biloba
Also AS AT1G43130evm.TU.chr6.753

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr7.1395 Hydrolase, alpha beta fold family protein
Ginchr9.1900 May be involved in both secretory and endocytic intracellular trafficking in the endosomal prevacuolar compartments
Ginchr9.173 May be involved in both secretory and endocytic intracellular trafficking in the endosomal prevacuolar compartments
Regulatory gene
Ginchr1.1425 DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Ginchr1.1560 Protein BASIC PENTACYSTEINE6-like
Ginchr1.2482 Cyclic dof factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003002 regionalization BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008150 biological_process BP
GO:0010051 xylem and phloem pattern formation BP
GO:0010222 stem vascular tissue pattern formation BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048856 anatomical structure development BP