Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ginchr6.805
View in Genome Browser
Position
GWHBAVD00000008:232862788-232889010 (+)
26222bp
Gene Type
gene
Gene Description (Protein Product)
Presenilin enhancer-2 subunit of gamma secretase
Organism
Ginkgo biloba
Also AS AT5G09310evm.TU.chr6.805

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginctg7345.1 Nicastrin
Ginctg8633.1 nicastrin
Ginchr7.1750 Transmembrane emp24 domain-containing protein
Regulatory gene
Ginchr1.1198 Zinc finger protein
Ginchr1.1308 homeobox-leucine zipper protein
Ginchr1.1488 homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005798 Golgi-associated vesicle CC
GO:0005886 plasma membrane CC
GO:0016020 membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0070765 gamma-secretase complex CC
GO:0071944 cell periphery CC
GO:0097708 intracellular vesicle CC
GO:0098796 membrane protein complex CC
GO:0098797 plasma membrane protein complex CC