Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ginchr7.385
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Position
GWHBAVD00000009:89826293-89827687 (-)
1394bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family
Organism
Ginkgo biloba
Also AS AT5G54160evm.TU.chr7.385

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ginchr8.1010 4-coumarate--CoA ligase-like
Ginchr8.1573 Caffeoylshikimate esterase-like
Ginchr8.1574 Alpha/beta hydrolase family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000302 response to reactive oxygen species BP
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008168 methyltransferase activity MF
GO:0008171 O-methyltransferase activity MF
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity MF
GO:0009058 biosynthetic process BP
GO:0009611 response to wounding BP
GO:0009636 response to toxic substance BP
GO:0009698 phenylpropanoid metabolic process BP
GO:0009699 phenylpropanoid biosynthetic process BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0009751 response to salicylic acid BP
GO:0009808 lignin metabolic process BP
GO:0009809 lignin biosynthetic process BP
GO:0009812 flavonoid metabolic process BP
GO:0009813 flavonoid biosynthetic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010817 regulation of hormone levels BP
GO:0014070 response to organic cyclic compound BP
GO:0016740 transferase activity MF
GO:0016741 transferase activity, transferring one-carbon groups MF
GO:0017096 acetylserotonin O-methyltransferase activity MF
GO:0017144 xenobiotic metabolic process BP
GO:0018130 heterocycle biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019748 secondary metabolic process BP
GO:0030186 melatonin metabolic process BP
GO:0030187 melatonin biosynthetic process BP
GO:0030744 luteolin O-methyltransferase activity MF
GO:0032259 methylation BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034754 hormone metabolic process BP
GO:0042221 response to chemical BP
GO:0042430 indole-containing compound metabolic process BP
GO:0042435 indole-containing compound biosynthetic process BP
GO:0042440 pigment metabolic process BP
GO:0042445 hormone metabolic process BP
GO:0042446 hormone biosynthetic process BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042542 response to hydrogen peroxide BP
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044550 secondary metabolite biosynthetic process BP
GO:0046148 pigment biosynthetic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046677 response to antibiotic BP
GO:0047763 caffeate O-methyltransferase activity MF
GO:0050896 response to stimulus BP
GO:0051552 flavone metabolic process BP
GO:0051553 flavone biosynthetic process BP
GO:0051554 flavonol metabolic process BP
GO:0051555 flavonol biosynthetic process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071704 organic substance metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901615 organic hydroxy compound metabolic process BP
GO:1901617 organic hydroxy compound biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map00941 Flavonoid biosynthesis Flavonoids are a major class of plant secondary metabolites that serves a multitude of functions including pigments and antioxidant activity. Flavonoids are synthesized from phenylpropanoid derivatives by condensation with malonyl-CoA. For example, condensation of p-coumaroyl-CoA (C6-C3) with three malonyl-CoA (C3) molecules results in naringenin chalcone with a diphenylpropane (C6-C3-C6) unit, which is converted to naringenin with the flavone (2-phenylchromen-4-one) backbone by conjugate ring closure. These and further modifications yield a variety of structural forms including chalcones, flavanones, dihyroflavonols, and flavans, anthocyanins, flavones and flavonols, and isoflavonoids.