Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
JcaChr06G11267.g
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Position
chr6:18907435-18909735 (-)
2300bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily
Organism
Juglans cathayensis
Also AS AT1G59820

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JcaChr09G10794.g Ubiquitin family
JcaChr09G12214.g Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
JcaChr08G12009.g Ubiquitin-like domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004012 ATPase-coupled intramembrane lipid transporter activity MF
GO:0005215 transporter activity MF
GO:0005319 lipid transporter activity MF
GO:0005548 phospholipid transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006820 monoatomic anion transport BP
GO:0006869 lipid transport BP
GO:0006900 vesicle budding from membrane BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0010876 lipid localization BP
GO:0012505 endomembrane system CC
GO:0015711 organic anion transport BP
GO:0015748 organophosphate ester transport BP
GO:0015914 phospholipid transport BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0022622 root system development BP
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033036 macromolecule localization BP
GO:0034204 lipid translocation BP
GO:0042623 ATP hydrolysis activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043492 ATPase-coupled transmembrane transporter activity MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045332 phospholipid translocation BP
GO:0048193 Golgi vesicle transport BP
GO:0048194 Golgi vesicle budding BP
GO:0048364 root development BP
GO:0048367 shoot system development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0061024 membrane organization BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071702 organic substance transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0097035 regulation of membrane lipid distribution BP
GO:0097708 intracellular vesicle CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0099402 plant organ development BP