PPGR - Gene Detail

Gene ID	JcaChr09G11463.g View in Genome Browser
Position	chr9:14467569-14467881 (-) 312bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the oxygen-dependent FAD-linked oxidoreductase family
Organism	Juglans cathayensis
Also AS	AT5G44390

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)

JcaChr16G11009.g Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

JcaChr14G11129.g Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

JcaChr09G11496.g Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0001666	response to hypoxia	BP
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0006950	response to stress	BP
GO:0008150	biological_process	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009987	cellular process	BP
GO:0012505	endomembrane system	CC
GO:0030312	external encapsulating structure	CC
GO:0033554	cellular response to stress	BP
GO:0036293	response to decreased oxygen levels	BP
GO:0036294	cellular response to decreased oxygen levels	BP
GO:0042221	response to chemical	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP
GO:0051716	cellular response to stimulus	BP
GO:0070482	response to oxygen levels	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071453	cellular response to oxygen levels	BP
GO:0071456	cellular response to hypoxia	BP
GO:0071944	cell periphery	CC

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.