Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
JcaChr11G12081.g
View in Genome Browser
Position
chr11:28967161-28970574 (+)
3413bp
Gene Type
gene
Gene Description (Protein Product)
transferase CAF17 homolog
Organism
Juglans cathayensis
Also AS AT4G12130

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JcaChr13G11180.g YrdC domain-containing protein
JcaChr12G10192.g magnesium protoporphyrin IX methyltransferase
JcaChr12G10491.g Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic 2Fe-2S and 4Fe-4S proteins
Regulatory gene
JcaChr01G10131.g Transcription factor
JcaChr01G10170.g Myb-related protein
JcaChr01G10522.g SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005759 mitochondrial matrix CC
GO:0006790 sulfur compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0016226 iron-sulfur cluster assembly BP
GO:0022607 cellular component assembly BP
GO:0031163 metallo-sulfur cluster assembly BP
GO:0031974 membrane-enclosed lumen CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0051186 obsolete cofactor metabolic process BP
GO:0070013 intracellular organelle lumen CC
GO:0071840 cellular component organization or biogenesis BP