Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
JcaChr13G10687.g
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Position
chr13:6140493-6142962 (+)
2469bp
Gene Type
gene
Gene Description (Protein Product)
Lignin degradation and detoxification of lignin-derived products
Organism
Juglans cathayensis
Also AS AT2G30210

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JcaChr14G11710.g Monocopper oxidase-like protein SKU5
JcaChr13G11132.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
JcaChr15G11916.g Lignin degradation and detoxification of lignin-derived products
Regulatory gene
JcaChr01G12547.g Dof zinc finger protein
JcaChr01G12589.g dof zinc finger protein
JcaChr02G10149.g Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0016491 oxidoreductase activity MF
GO:0016722 oxidoreductase activity, acting on metal ions MF
GO:0055114 obsolete oxidation-reduction process BP