Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
JcaChr13G11486.g
View in Genome Browser
Position
chr13:16806987-16808933 (-)
1946bp
Gene Type
gene
Gene Description (Protein Product)
microtubule nucleation by microtubule organizing center
Organism
Juglans cathayensis
Also AS AT3G43610

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JcaChr16G10410.g Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome
Regulatory gene
JcaChr05G10606.g Protein BASIC PENTACYSTEINE4-like
JcaChr05G11449.g Protein BASIC PENTACYSTEINE2-like
JcaChr06G10816.g Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000226 microtubule cytoskeleton organization BP
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0000923 equatorial microtubule organizing center CC
GO:0000930 gamma-tubulin complex CC
GO:0000931 gamma-tubulin ring complex CC
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005200 structural constituent of cytoskeleton MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005813 centrosome CC
GO:0005815 microtubule organizing center CC
GO:0005816 spindle pole body CC
GO:0005822 inner plaque of spindle pole body CC
GO:0005825 half bridge of spindle pole body CC
GO:0005829 cytosol CC
GO:0005856 cytoskeleton CC
GO:0006810 transport BP
GO:0006928 obsolete movement of cell or subcellular component BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007018 microtubule-based movement BP
GO:0007020 microtubule nucleation BP
GO:0007049 cell cycle BP
GO:0007051 spindle organization BP
GO:0007052 mitotic spindle organization BP
GO:0007097 nuclear migration BP
GO:0007098 centrosome cycle BP
GO:0007163 establishment or maintenance of cell polarity BP
GO:0008017 microtubule binding MF
GO:0008092 cytoskeletal protein binding MF
GO:0008150 biological_process BP
GO:0008274 gamma-tubulin ring complex CC
GO:0008275 gamma-tubulin small complex CC
GO:0008360 regulation of cell shape BP
GO:0009987 cellular process BP
GO:0015630 microtubule cytoskeleton CC
GO:0015631 tubulin binding MF
GO:0016043 cellular component organization BP
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0022604 regulation of cell morphogenesis BP
GO:0022607 cellular component assembly BP
GO:0031021 interphase microtubule organizing center CC
GO:0031023 microtubule organizing center organization BP
GO:0031109 microtubule polymerization or depolymerization BP
GO:0031122 cytoplasmic microtubule organization BP
GO:0032153 cell division site CC
GO:0032155 obsolete cell division site part CC
GO:0032991 protein-containing complex CC
GO:0034453 microtubule anchoring BP
GO:0034622 protein-containing complex assembly BP
GO:0034631 microtubule anchoring at spindle pole body BP
GO:0043015 gamma-tubulin binding MF
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044450 obsolete microtubule organizing center part CC
GO:0044464 obsolete cell part CC
GO:0044732 mitotic spindle pole body CC
GO:0046785 microtubule polymerization BP
GO:0046907 intracellular transport BP
GO:0048285 organelle fission BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0051128 regulation of cellular component organization BP
GO:0051179 localization BP
GO:0051225 spindle assembly BP
GO:0051234 establishment of localization BP
GO:0051258 protein polymerization BP
GO:0051298 centrosome duplication BP
GO:0051321 meiotic cell cycle BP
GO:0051415 microtubule nucleation by interphase microtubule organizing center BP
GO:0051418 microtubule nucleation by microtubule organizing center BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051647 nucleus localization BP
GO:0051649 establishment of localization in cell BP
GO:0051656 establishment of organelle localization BP
GO:0061496 half bridge of mitotic spindle pole body CC
GO:0061497 inner plaque of mitotic spindle pole body CC
GO:0065003 protein-containing complex assembly BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070925 organelle assembly BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071957 old mitotic spindle pole body CC
GO:0071963 establishment or maintenance of cell polarity regulating cell shape BP
GO:0072393 microtubule anchoring at microtubule organizing center BP
GO:0090307 mitotic spindle assembly BP
GO:0097435 supramolecular fiber organization BP
GO:0098863 nuclear migration by microtubule mediated pushing forces BP
GO:0099098 microtubule polymerization based movement BP
GO:0099111 microtubule-based transport BP
GO:0140014 mitotic nuclear division BP
GO:1902850 microtubule cytoskeleton organization involved in mitosis BP
GO:1903047 mitotic cell cycle process BP
GO:1990734 astral microtubule anchoring at mitotic spindle pole body BP