Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
JcaChr13G11809.g
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Position
chr13:22161752-22165702 (-)
3950bp
Gene Type
gene
Gene Description (Protein Product)
RINT-1 / TIP-1 family
Organism
Juglans cathayensis
Also AS AT1G08400

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JcaChr14G11519.g Enhancer of polycomb-like protein
JcaChr15G11969.g Probably involved in the biogenesis of the COX complex
JcaChr15G11968.g Probably involved in the biogenesis of the COX complex
Regulatory gene
JcaChr01G10316.g AP2-like ethylene-responsive transcription factor
JcaChr01G10497.g ZF-HD protein dimerisation region
JcaChr01G10545.g Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005798 Golgi-associated vesicle CC
GO:0012505 endomembrane system CC
GO:0030133 transport vesicle CC
GO:0030134 COPII-coated ER to Golgi transport vesicle CC
GO:0030135 coated vesicle CC
GO:0030137 COPI-coated vesicle CC
GO:0030142 COPI-coated Golgi to ER transport vesicle CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0097708 intracellular vesicle CC