Basic Information
Gene ID
JcaChr16G11138.g
Position
chr16:14773337-14777873 (+)
4536bp
Gene Type
gene
Gene Description (Protein Product)
exonuclease
Organism
Also AS AT1G18090

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JcaChr16G11230.g Protein BREAST CANCER SUSCEPTIBILITY 1 homolog
Regulatory gene
JcaChr01G10170.g Myb-related protein
JcaChr01G10316.g AP2-like ethylene-responsive transcription factor
JcaChr01G10522.g SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03430 Mismatch repair DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.