PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	JhiChr01G10012.g View in Genome Browser
Position	chr1:40627122-40633900 (+) 6778bp
Gene Type	gene
Gene Description (Protein Product)	Alanine aminotransferase
Organism	Juglans hindsii
Also AS	AT1G72330

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	JhiChr09G12060.g Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate JhiChr15G11405.g Belongs to the isocitrate and isopropylmalate dehydrogenases family JhiChr01G10793.g 2-oxoglutarate dehydrogenase
Regulatory gene	JhiChr01G10351.g Tesmin/TSO1-like CXC domain JhiChr01G12222.g B3 domain-containing protein JhiChr01G12925.g B3 domain-containing

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000166	nucleotide binding	MF
GO:0001666	response to hypoxia	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004021	L-alanine:2-oxoglutarate aminotransferase activity	MF
GO:0005488	binding	MF
GO:0005524	ATP binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006082	organic acid metabolic process	BP
GO:0006520	amino acid metabolic process	BP
GO:0006522	alanine metabolic process	BP
GO:0006524	alanine catabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0008144	obsolete drug binding	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008483	transaminase activity	MF
GO:0009056	catabolic process	BP
GO:0009063	amino acid catabolic process	BP
GO:0009078	pyruvate family amino acid metabolic process	BP
GO:0009080	pyruvate family amino acid catabolic process	BP
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009628	response to abiotic stimulus	BP
GO:0009987	cellular process	BP
GO:0010035	response to inorganic substance	BP
GO:0010038	response to metal ion	BP
GO:0016054	organic acid catabolic process	BP
GO:0016740	transferase activity	MF
GO:0016769	transferase activity, transferring nitrogenous groups	MF
GO:0017076	purine nucleotide binding	MF
GO:0019481	L-alanine catabolic process, by transamination	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0030554	adenyl nucleotide binding	MF
GO:0032553	ribonucleotide binding	MF
GO:0032555	purine ribonucleotide binding	MF
GO:0032559	adenyl ribonucleotide binding	MF
GO:0035639	purine ribonucleoside triphosphate binding	MF
GO:0036094	small molecule binding	MF
GO:0036293	response to decreased oxygen levels	BP
GO:0042221	response to chemical	BP
GO:0042851	L-alanine metabolic process	BP
GO:0042853	L-alanine catabolic process	BP
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046395	carboxylic acid catabolic process	BP
GO:0046686	response to cadmium ion	BP
GO:0047635	alanine-oxo-acid transaminase activity	MF
GO:0050896	response to stimulus	BP
GO:0070482	response to oxygen levels	BP
GO:0071704	organic substance metabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0097367	carbohydrate derivative binding	MF
GO:1901265	nucleoside phosphate binding	MF
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901605	alpha-amino acid metabolic process	BP
GO:1901606	alpha-amino acid catabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00710	Carbon fixation in photosynthetic organisms	-
map00250	Alanine, aspartate and glutamate metabolism	-