Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
JhiChr05G12344.g
View in Genome Browser
Position
chr5:28201240-28202992 (-)
1752bp
Gene Type
gene
Gene Description (Protein Product)
transport protein
Organism
Juglans hindsii
Also AS AT5G43670

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JhiChr13G10157.g transport) protein
JhiChr08G10798.g transport protein
JhiChr06G10794.g Ribonuclease H protein
Regulatory gene
JhiChr01G10112.g isoform X1
JhiChr01G10144.g Telomere repeat-binding factor
JhiChr01G10210.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0001501 skeletal system development BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005798 Golgi-associated vesicle CC
GO:0005829 cytosol CC
GO:0006810 transport BP
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport BP
GO:0006900 vesicle budding from membrane BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008270 zinc ion binding MF
GO:0009653 anatomical structure morphogenesis BP
GO:0009790 embryo development BP
GO:0009792 embryo development ending in birth or egg hatching BP
GO:0009887 animal organ morphogenesis BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0012506 vesicle membrane CC
GO:0012507 ER to Golgi transport vesicle membrane CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0019898 extrinsic component of membrane CC
GO:0022607 cellular component assembly BP
GO:0030117 membrane coat CC
GO:0030120 vesicle coat CC
GO:0030127 COPII vesicle coat CC
GO:0030133 transport vesicle CC
GO:0030134 COPII-coated ER to Golgi transport vesicle CC
GO:0030135 coated vesicle CC
GO:0030658 transport vesicle membrane CC
GO:0030659 cytoplasmic vesicle membrane CC
GO:0030660 Golgi-associated vesicle membrane CC
GO:0030662 coated vesicle membrane CC
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0033333 fin development BP
GO:0033334 fin morphogenesis BP
GO:0033339 pectoral fin development BP
GO:0034622 protein-containing complex assembly BP
GO:0035107 appendage morphogenesis BP
GO:0035138 pectoral fin morphogenesis BP
GO:0035459 vesicle cargo loading BP
GO:0043009 chordate embryonic development BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0046907 intracellular transport BP
GO:0046914 transition metal ion binding MF
GO:0048193 Golgi vesicle transport BP
GO:0048194 Golgi vesicle budding BP
GO:0048475 coated membrane CC
GO:0048513 animal organ development BP
GO:0048562 embryonic organ morphogenesis BP
GO:0048568 embryonic organ development BP
GO:0048598 embryonic morphogenesis BP
GO:0048701 embryonic cranial skeleton morphogenesis BP
GO:0048702 embryonic neurocranium morphogenesis BP
GO:0048704 embryonic skeletal system morphogenesis BP
GO:0048705 skeletal system morphogenesis BP
GO:0048706 embryonic skeletal system development BP
GO:0048731 system development BP
GO:0048736 appendage development BP
GO:0048856 anatomical structure development BP
GO:0051179 localization BP
GO:0051216 cartilage development BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051668 localization within membrane BP
GO:0061024 membrane organization BP
GO:0061448 connective tissue development BP
GO:0065003 protein-containing complex assembly BP
GO:0070971 endoplasmic reticulum exit site CC
GO:0071840 cellular component organization or biogenesis BP
GO:0090110 COPII-coated vesicle cargo loading BP
GO:0090114 COPII-coated vesicle budding BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
GO:1904888 cranial skeletal system development BP
KEGG Term Name Description
map04141 Protein processing in endoplasmic reticulum The endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylated. Correctly folded proteins are packaged into transport vesicles that shuttle them to the Golgi complex. Misfolded proteins are retained within the ER lumen in complex with molecular chaperones. Proteins that are terminally misfolded bind to BiP and are directed toward degradation through the proteasome in a process called ER-associated degradation (ERAD). Accumulation of misfolded proteins in the ER causes ER stress and activates a signaling pathway called the unfolded protein response (UPR). In certain severe situations, however, the protective mechanisms activated by the UPR are not sufficient to restore normal ER function and cells die by apoptosis.