PPGR - Gene Detail

Gene ID	JhiChr10G11715.g View in Genome Browser
Position	chr10:23166642-23167965 (-) 1323bp
Gene Type	gene
Gene Description (Protein Product)	SNARE-complex protein Syntaxin-18 N-terminus
Organism	Juglans hindsii
Also AS	AT1G51740

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	JhiChr13G11367.g Vesicle transport v-SNARE JhiChr13G11039.g Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor JhiChr12G11370.g Belongs to the syntaxin family
Regulatory gene	JhiChr01G10819.g dof zinc finger protein JhiChr01G11697.g dof zinc finger protein JhiChr01G12222.g B3 domain-containing protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0006810	transport	BP
GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	BP
GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	BP
GO:0008150	biological_process	BP
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0016192	vesicle-mediated transport	BP
GO:0031201	SNARE complex	CC
GO:0032991	protein-containing complex	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046907	intracellular transport	BP
GO:0048193	Golgi vesicle transport	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051641	cellular localization	BP
GO:0051649	establishment of localization in cell	BP
GO:0098796	membrane protein complex	CC

KEGG Term	Name	Description
map04145	Phagosome	Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
map04130	SNARE interactions in vesicular transport	-