PPGR - Gene Detail

Basic Information

Gene ID	JhiChr12G10974.g View in Genome Browser
Position	chr12:15340742-15342896 (-) 2154bp
Gene Type	gene
Gene Description (Protein Product)	ATP-dependent Clp protease proteolytic subunit
Organism	Juglans hindsii
Also AS	AT5G45390

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

JhiChr12G11283.g ATP-dependent Clp protease proteolytic

JhiChr14G10979.g Belongs to the chaperonin (HSP60) family

JhiChr12G11303.g Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome

Regulatory gene

JhiChr01G10351.g Tesmin/TSO1-like CXC domain

JhiChr01G10551.g LOB domain-containing protein

JhiChr01G10716.g LOB domain-containing protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006996	organelle organization	BP
GO:0008150	biological_process	BP
GO:0009368	endopeptidase Clp complex	CC
GO:0009507	chloroplast	CC
GO:0009526	plastid envelope	CC
GO:0009532	plastid stroma	CC
GO:0009534	chloroplast thylakoid	CC
GO:0009535	chloroplast thylakoid membrane	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009579	thylakoid	CC
GO:0009657	plastid organization	BP
GO:0009658	chloroplast organization	BP
GO:0009840	chloroplastic endopeptidase Clp complex	CC
GO:0009941	chloroplast envelope	CC
GO:0009987	cellular process	BP
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0031976	plastid thylakoid	CC
GO:0031984	organelle subcompartment	CC
GO:0032991	protein-containing complex	CC
GO:0034357	photosynthetic membrane	CC
GO:0040034	regulation of development, heterochronic	BP
GO:0042651	thylakoid membrane	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044436	obsolete thylakoid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0048506	regulation of timing of meristematic phase transition	BP
GO:0048509	regulation of meristem development	BP
GO:0048510	regulation of timing of transition from vegetative to reproductive phase	BP
GO:0050789	regulation of biological process	BP
GO:0050793	regulation of developmental process	BP
GO:0055035	plastid thylakoid membrane	CC
GO:0065007	biological regulation	BP
GO:0071840	cellular component organization or biogenesis	BP