Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
JhiChr13G10245.g
View in Genome Browser
Position
chr13:20769380-20770207 (-)
827bp
Gene Type
gene
Gene Description (Protein Product)
Small nuclear ribonucleoprotein-associated protein
Organism
Juglans hindsii
Also AS AT4G20440

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JhiChr16G11423.g 116 kDa U5 small nuclear ribonucleoprotein
JhiChr13G10473.g U6 snRNA-associated Sm-like protein LSm8
JhiChr16G10594.g U6 snRNA-associated Sm-like protein
Regulatory gene
JhiChr01G10112.g isoform X1
JhiChr01G10144.g Telomere repeat-binding factor
JhiChr01G10210.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.