PPGR - Gene Detail

Basic Information

Gene ID	JhiChr15G12096.g View in Genome Browser
Position	chr15:31901315-31902472 (+) 1157bp
Gene Type	gene
Gene Description (Protein Product)	S-adenosylmethionine decarboxylase
Organism	Juglans hindsii
Also AS	AT3G25570

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

JhiChr15G12281.g Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family

JhiChr16G11152.g Wuschel-related homeobox

Regulatory gene

JhiChr01G10672.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

JhiChr01G10819.g dof zinc finger protein

JhiChr01G11675.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004014	adenosylmethionine decarboxylase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006576	biogenic amine metabolic process	BP
GO:0006595	polyamine metabolic process	BP
GO:0006596	polyamine biosynthetic process	BP
GO:0006597	spermine biosynthetic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008215	spermine metabolic process	BP
GO:0008216	spermidine metabolic process	BP
GO:0008295	spermidine biosynthetic process	BP
GO:0009058	biosynthetic process	BP
GO:0009308	amine metabolic process	BP
GO:0009309	amine biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0016829	lyase activity	MF
GO:0016830	carbon-carbon lyase activity	MF
GO:0016831	carboxy-lyase activity	MF
GO:0017144	xenobiotic metabolic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0042401	biogenic amine biosynthetic process	BP
GO:0044106	amine metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0071704	organic substance metabolic process	BP
GO:0097164	ammonium ion metabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00330	Arginine and proline metabolism	-
map00270	Cysteine and methionine metabolism	Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].